OK. There are a couple "attributes" to add to the dset to attach the statistical information for the p-to-t calcs. These can be aded in a couple different ways, this (below) seems the easier one than putting in individual attributes.
Let's say you have a dset of 2 subbricks, where the [0]th brick is an effect estimate, and the [1]th brick is a t-stat with 412 degrees of freedom (DOFs). Then the following would take some DSET and populate the [1]th brick with the desired stat information (and put some reference labels for the strings, for good measure):
set DSET = some_data_set_name.nii.gz
set stat_lab = fitt
set dof = 412
3drefit \
-sublabel 0 EFFECT_ESTIMATE \
-sublabel 1 STAT_ESTIMATE \
-substatpar 1 ${stat_lab} ${dof} \
${DSET}
# optionally, add FDR curve info; see "-FDRmask .." and "-STATmask .." options for this, as well
3drefit \
-addFDR \
${DSET}
How does that seem?
-pt
Edited 1 time(s). Last edit at 11/08/2022 09:01AM by ptaylor.
