afni.nimh.nih.gov

Hi, Robin-

Those look reasonable for a starting point. Note how it is much closer than in the initially shown case.

You could also check those overlaps (anatomical-template, and EPI-anatomical) before running @Align_Centers here---that might not be necessary, if the datasets are already well-centered around the (x,y,z)=(0,0,0) coordinate origin.

--pt