AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 27, 2023 02:36PM
Hello Rick,

The timing files are now correct and we are still getting the collinearity error.

For stim_times 34 & 35 of our model, it's common to have runs without an onset. Especially stim_times 35. Empty runs are denoted as a * in the timing files. Is it possible this is causing the issue?

-stim_times 34 /usr/local/mridata/Smith_Merit/Processed_Data/nifti/${subject}/ses-sen/func/time_files/remember_foils.1D 'TENT(0,16,21)' -stim_label 34 remembered_foils \
-stim_times 35 /usr/local/mridata/Smith_Merit/Processed_Data/nifti/${subject}/ses-sen/func/time_files/forgotten_foils.1D 'TENT(0,16,21)' -stim_label 35 forgotten_foils \

Thank you,
Catherine
Subject Author Posted

Collinearity Warning with 3dREMLfit

Catherine Tallman January 10, 2023 12:47PM

Re: Collinearity Warning with 3dREMLfit

rick reynolds January 10, 2023 05:09PM

Re: Collinearity Warning with 3dREMLfit

Catherine Tallman January 15, 2023 03:18PM

Re: Collinearity Warning with 3dREMLfit

Catherine Tallman February 07, 2023 05:19PM

Re: Collinearity Warning with 3dREMLfit

rick reynolds February 07, 2023 08:07PM

Re: Collinearity Warning with 3dREMLfit

Catherine Tallman February 14, 2023 05:10PM

Re: Collinearity Warning with 3dREMLfit

Catherine Tallman February 27, 2023 02:36PM

Re: Collinearity Warning with 3dREMLfit

rick reynolds February 27, 2023 03:15PM

Re: Collinearity Warning with 3dREMLfit

rick reynolds March 06, 2023 04:27PM