AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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bgreiner
February 06, 2023 03:15PM
Ah ok, did not realize '-' was technically before alphabetically.

I tried the command you suggested and the output DET final list file appeared to have sorted the files correctly. But when looking at the images in the afni gui, the x and y directions are extremely stretched, thus the problem seems to still persist. In case it matters, this only seems to happen when inputting the anatomical scan DICOM images and there are no issues with Dimon or to3d when inputting the EPI images.

Another brief note, is we were able to solve the problem by using the dcm2niix function.
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Subject Author Posted

to3d file order issue

bgreiner January 30, 2023 01:38PM

Re: to3d file order issue

rick reynolds January 30, 2023 05:05PM

Re: to3d file order issue

bgreiner February 06, 2023 03:15PM

Re: to3d file order issue

rick reynolds February 06, 2023 03:29PM

Re: to3d file order issue

bgreiner February 06, 2023 03:37PM

Re: to3d file order issue

rick reynolds February 06, 2023 03:52PM