Hi, Sam-
Thanks for providing that.
The CentOS depending list is here:
[
afni.nimh.nih.gov]
... and includes Xvfb. Are you running on a managed software system, or on one where you have sudo/admin privileges to install software?
I also see this failure message:
** failed to load module matplotlib.pyplot
... which will be problematic at times. Your Python of choice comes from miniconda:
/cubric/data/c1639425/miniconda3/envs/python3.9/bin/python
... and you can matplotlib to your conda environment, here are some notes:
https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/background_install/miniconda.html#short-list-of-conda-commands
And I think adding matplotlib could be done with this on your system, since your env name appears to be "python3.9":
conda install -n python3.9 "matplotlib>=2.2.3"
--pt
