AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 18, 2003 02:28PM
Hi Bob,

Thanks very much for all your replies!

I think I am clear to some of my questions now. I am sorry for not providing some details before asking questions. Here is an example of "a very little difference" in the mean values between "3D+t Statistic" and 3dTstat for one voxel from my dataset: 979.2806 (given by "3D+t Statistic") and 978.98 (given by 3dTstat). These values were copied from the "Define Function" box. I am just curious because they are different.

I have gone through the -help output of 3dvolreg for several times and tried to use some options for registration. Sometimes it is hard to tell the difference between different options or different values for one option by visual check only. I just want to know which options are good for high resolution SPGR dataset and which ones are good for EPI dataset, as you mentioned in AFNI manual that in most cases "BK" is the best for functional dataset and "Li" is the best for anatomical dataset when warp them on demand.

Thanks again,
Xiangchuan Chen
Subject Author Posted

"3D+t Statistic" and 3dTstat

Xiangchuan Chen February 17, 2003 06:00PM

Re: "3D+t Statistic" and 3dTstat

bob cox February 18, 2003 09:30AM

Re: "3D+t Statistic" and 3dTstat

Xiangchuan Chen February 18, 2003 02:28PM

Re: "3D+t Statistic" and 3dTstat

bob cox February 19, 2003 08:36AM