AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
April 16, 2003 12:19PM

Hello Yufeng:

A1: The numerator df for the GLT F-stat is equal to the number of linear
constraints; i.e., the number of rows in the GLT matrix. In this case,
since there is one row, the numerator df = 1. The denominator df is equal
to the (error) degrees of freedom from fitting the Full Model. This can
be calculated as follows (for Example 1.4.4.5):

den df =
20 (number of data points)
- 2 (max. of the maxlags)
- 2 (constant and slope baseline parameters)
- 3*3 (3 stimuli, 3 time lags each)
= 7

The df for the t-stat is the same as the denominator df of the F-stat (i.e.,7).
Note that, in the special case where the numerator df of the F-stat is 1,
the F-stat is equal to the square of the t-stat (1.5420^2 = 2.37776).


A2: As illustrated above, the denominator df is essentially equal to the
number of data points minus the number of estimated parameters. Neither the
numerator nor denominator df depends on the number of trials of each stimulus.
This does NOT mean that the statistical result itself is independent of the
number of trials of each stimulus.


For more details, please see Sections 1.2.11 and 1.4.4 of the documentation
in file 3dDeconvolve.ps.

Doug Ward
Subject Author Posted

LC in 3dDeconvolve

Yufeng Zang April 16, 2003 02:06AM

Re: LC in 3dDeconvolve

B. Douglas Ward April 16, 2003 12:19PM

Re: LC in 3dDeconvolve

Yufeng Zang April 16, 2003 08:44PM

Re: LC in 3dDeconvolve

B. Douglas Ward April 17, 2003 11:24AM