AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Svenja
July 18, 2003 03:53PM
Does anybody have experience on how to create .BRIK files of data that stems from a split-sagittal acquisition? I have both, a T1 image and EPI data consisting of 14 sagittal slices, 7 in each hemisphere of the brain, and additionally an SPGR image of the entire brain. I would like to create a single BRIK file that has those 14 slices at the correct coordinates aligned to the SPGR.

My straight-forward solution has been so far to separate the T1 and EPI data according to the brain half they belong to and to create half-brain BRIKs. That works ok, but then I only can work with half a brain at a time. I could also add them together later in the process, but splitting them first and putting them back together seems rather costly.

Is there a way that, e.g. to3d can be used to inout the coordinates of both halves simultaneously?

Thanks,
Svenja.
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Subject Author Posted

split-sagittal acquisition

Svenja July 18, 2003 03:53PM

Re: split-sagittal acquisition

bob cox July 18, 2003 04:22PM

Re: split-sagittal acquisition

Tom Liu August 22, 2003 06:32PM

Re: split-sagittal acquisition

Svenja July 18, 2003 05:03PM