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December 05, 2003 07:53PM
Howdy again,

Each time I run the MapIcosahedron program I get the following error:

Warning SUMA_ReleaseLink: Inode is null. Returning -1.
Warning SUMA_ReleaseLink: Inode is null. Returning -1.
Segmentation fault (core dumped)

The core is dumped no matter which options/parameters I use. However, the appropriate spec files seem to be created. Any thoughts on why this may occur and whether this is a very bad thing?

Thanks,
Jeremy s.

The following is the screen output from the command "MapIcosahedron -spec mcgurk002_lh.spec -rd -1 -ld -1 -prefix mcgurk002_lh.mesh" if it is helpful:

SUMA_FreeSurfer_Read_eng: File ./lh.smoothwm.asc exists and will be read.
Comment: #!ascii version of lh.smoothwm
...
SUMA_FreeSurfer_Read_eng: File ./lh.inflated.asc exists and will be read.
Comment: #!ascii version of lh.inflated
...
SUMA_FreeSurfer_Read_eng: File ./lh.sphere.asc exists and will be read.
Comment: #!ascii version of lh.sphere
...
SUMA_FreeSurfer_Read_eng: File ./lh.white.asc exists and will be read.
Comment: #!ascii version of lh.white
...
SUMA_FreeSurfer_Read_eng: File ./lh.sphere.reg.asc exists and will be read.
Comment: #!ascii version of lh.sphere.reg
...
SUMA_SurfaceMetrics_eng: Calculating surface metrics, please be patient...
SUMA_Make_Edge_List_eng: Min/Max number of edge hosting triangles: [2/2]
SUMA_CreateIcosahedron: Making Edge list ....
SUMA_Make_Edge_List_eng: Min/Max number of edge hosting triangles: [2/2]
SUMA_CreateIcosahedron: Creating inode for XYZ_XJ3WT01-wQ2w2nelYPtiaw....
SUMA_CreateIcosahedron: Creating inode DONE....
SUMA_MakeConsistent: 259920/259920 (100.000000%) triangles checked.
SUMA_MakeConsistent: 255400 triangles were flipped to make them consistent with the triangle containing the first edge in the list.
SUMA_CreateIcosahedron: Eeeexcellent. All triangles consistent.
SUMA_CreateIcosahedron: Determining MemberFaceSets ...
Computing intersections...
SUMA_MapIcosahedron-main: Now writing surface mcgurk002_lh.mesh_mappedSphrNoReg.asc to disk ...
SUMA_MapIcosahedron-main: Now writing surface mcgurk002_lh.mesh_mappedInfl.asc to disk ...
SUMA_MapIcosahedron-main: Now writing surface mcgurk002_lh.mesh_mappedSmWm.asc to disk ...
SUMA_MapIcosahedron-main: Now writing surface mcgurk002_lh.mesh_mappedWhite.asc to disk ...

SUMA_MapSurface took 215.007828 seconds to execute.

* To view in SUMA, load spec file mcgurk002_lh.mesh.spec *

Warning SUMA_ReleaseLink: Inode is null. Returning -1.
Warning SUMA_ReleaseLink: Inode is null. Returning -1.
Segmentation fault (core dumped)
Subject Author Posted

MapIcosahedron - "Segmentation fault (core dumped)":

Jeremy Skipper December 05, 2003 07:53PM

Re: MapIcosahedron - "Segmentation fault (core dumped)":

Ziad December 06, 2003 08:08AM

Re: MapIcosahedron - "Segmentation fault (core dumped)":

bob cox December 08, 2003 01:24PM

Re: MapIcosahedron - "Segmentation fault (core dumped)":

Jeremy Skipper December 08, 2003 01:40PM

Re: MapIcosahedron - "Segmentation fault (core dumped)":

Ziad Saad December 08, 2003 05:37PM