AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 30, 2003 11:59AM
Jeremy,

I assume that *.hit.Gb3+tlrc and *.miss.Gb3+tlrc for each subject are two subbricks from your glt output (area under the curve for hit and miss respectively) of 3dDeconvolve. If this is the case, the failure to detect any significant group difference betweem hit and miss could be due to the following three reasons:

(1) Eight subjects might be too few for group analysis with random effect.

(2) Even if you see significant differences with the output from 3dDeconvolve for each subject, they might not share much overlapping area among most of the eight subjects. If this is the case, group analysis would unfortunately fail.

(3) I imagine that there might have some nonzero covariance between hit and miss for each subject. So you might consider running 3dttest on individual coefficients of hit and miss from 3dDevonvolve. Run 3dttest with the '-paired' option. If the correlation between hit and miss is positive, the contrast test in 3dANOVA2, which is an unpaired t test, tends to be less powerful on difference detection than 3dttest with a paired contrast test.

Gang
Subject Author Posted

ANOVA differences

Jeremy Purcell December 29, 2003 05:10PM

Re: ANOVA differences

Gang Chen December 30, 2003 10:48AM

Re: ANOVA differences

Jeremy Purcell December 30, 2003 11:08AM

Re: ANOVA differences

Gang Chen December 30, 2003 11:59AM

Re: ANOVA differences

Jeremy December 30, 2003 12:58PM

Re: ANOVA differences

Gang Chen December 30, 2003 01:18PM

Re: ANOVA differences

Jeremy December 30, 2003 01:30PM