AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Tom Ross
January 23, 2004 03:46PM
You could use the option -keepthr (and, BTW, drop the index options, as 0 and 1 are their defaults). With this option, the correlation coefficidnts will not be thresholded/clustered (ie they remain unchanged), but for most purposes this is probably OK. If in a subsequent analysis step you do need the clustered correlation coefficients, you could always use the intensity subbrick as a mask.
Tom
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Clustering

Wolfgang January 22, 2004 02:18PM

Re: Clustering

Tom Ross January 23, 2004 03:46PM