AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 04, 2004 11:09AM
Hi David,
I guess your choice of technique might depend on why you want to reduce your resolution in this way. Is it to reduce the number of voxels for computational efficiency? If so, I'd try 3dresample, using the -dxyz option. Keep the in-plane voxel dimensions the same, and increase your slice thickness five-fold. One thing to watch out for in 3dresample is that sometimes activation shifts to one side slightly after resampling. To prevent this, you may need to use 3dZeropad to add slices of zeros to the edges before resampling.
On the other hand, if your intent is to smooth out the data, you might want to try one of the 3dmerge smoothing options. Hope this helps.
Sally

Subject Author Posted

Summing slices

David Manners February 04, 2004 05:27AM

Re: Summing slices

Ziad Saad February 04, 2004 09:46AM

Re: Summing slices

Tom Ross February 04, 2004 10:40AM

Re: Summing slices

sally durgerian February 04, 2004 11:09AM

Re: Summing slices

David Manners February 05, 2004 11:56AM