Hi Vitaly,
You should be able to get the center of mass this way:
1- Draw the ROI in SUMA
2- Use ROI2datset to turn the ROI to a dataset for use in Surf2Vol
(You may not need this step if your ROIs do not overlap and saved
in 1D format)
3- Use 3dSurf2Vol to change the ROI or its dataset form to a volumetric data
set which will contain clusters forming you ROI (VOI).
4- 3dclust will write out information about the clusters including center of
mass.
I hope this helps.
cheers,
-ziad