Hey folks,
For those of you who are interested, we have made a few modifications to the script in How-to #5 (Group Analysis using AFNI 3dANOVA programs). The script I'm referring to is @analyze_ht05, which does all the pre-processing of individual subjects' data in preparation for the group analysis. This includes normalizing the time series data by computing the percent signal change on a voxel-by-voxel basis. After some discussion on the message board, we've moved around a few steps. Take a look if you're interested:
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afni.nimh.nih.gov]
Please check out the how-to's if you haven't already. They include step-by-step instructions on how to analyze FMRI data using AFNI. We are currently working on how-to#4: Deconvolution analysis with AFNI 3dDeconvolve.
Enjoy!
Peggy