AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 03, 2005 01:20PM
Hi Jim,

You should either use '-datum float', or multiply your expression
by some cutoff value (or by as mask value, as is done in HowTo #5).

You dataset is probably of type short, and so the sub-bricks are
scaled, where the factor depends on the most extreme value.
Since voxels outside the brain can have huge %change values,
you probably get close to integral resolution of numbers in some
sub-bricks (making it difficult to tell 0 from 0.7, for example).

So using floats gives you the accuracy/numerical resolution, but
the datasets are twice as big.

And using a mask or cutoff value will reduce the tendancy to have
large percent signal changes, so the scale factor will actually do
something useful.

Either way should work out.

- rick

Subject Author Posted

Using -datum float in 3dcalc

Jim Bjork May 03, 2005 11:46AM

Re: Using -datum float in 3dcalc

rick reynolds May 03, 2005 01:20PM