afni.nimh.nih.gov

Hi,

I am going to apologize in advance if I sound like I'm not sure what I'm saying....

We usually manually coregister our anatomies with their respective percentage signal change files using 3drefit. So basically we eyeball whether the two align with each other and adjust the origin of the percentage signal change file. Is there a way to do this automatically???

I've tried doing "3drefit -duporigin <anat> <%change file>" but that didn't align them.

Thanks for any help!
g