AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Daniel Glen
June 02, 2006 01:10PM
You might want to create the mask earlier in your processing stream with 3dAutomask and then apply the mask at a later point. 3dCliplevel can give you a threshold you might want to try.

Also this might be a good time to point out a new option to 3dAutomask, -erode nn, to erode back nn voxel layers.
Subject Author Posted

deciding on a clip level?

Colm Connolly June 02, 2006 12:37PM

Re: deciding on a clip level?

Daniel Glen June 02, 2006 01:10PM