AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
July 24, 2007 07:58PM
Hi Ji,

The '-Fourier' option is the default in 3dvolreg, so using it
should have no effect.

So heptic produced larger movement values than Fourier, is
that what you are saying? What sort of value changes are you
seeing?

Note that it hard to say what is better or worse. Though it
is easy to say that better means getting closer to reality,
the trouble is we can only estimate what we think reality is.
A larger motion value is not necessarily worse, it might even
be more accurate.

Anyway, there is no significant recommendation between the
choices, as far as I know. Each interpolation function has
pros and cons (of course). Fourier is generally considered
the most accurate, but can have a ringing effect. High order
polynomials can fluctuate a bit quickly, but low order
polynomials can truncate local peaks. On the other hand, all
of the methods produce reasonable results.

The current processing stream that we teach from uses Fourier
interpolation. But any of cubic, quintic or heptic would seem
fine, too.

I'm glad to be of service in not providing any concrete response
whatsoever. :)

- rick

Subject Author Posted

3dvolreg Fourier option

Ji July 24, 2007 06:02PM

Re: 3dvolreg Fourier option

rick reynolds July 24, 2007 07:58PM

Re: 3dvolreg Fourier option

Leah May 20, 2009 02:23PM

Re: 3dvolreg Fourier option

rick reynolds May 20, 2009 03:26PM