AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Kun
September 06, 2007 06:29PM
Hi,
I recently updated my afni to Version AFNI_2007_05_29_1644. Now I am getting errors running to3d on GE dicome files (GE HDx 3.0T 14M4) as below:

>>to3d -prefix temp i*
++ to3d: AFNI version=AFNI_2007_05_29_1644 (May 30 2007) [32-bit]
++ Authored by: RW Cox
++ Counting images: total=15 2D slices
++ DICOM WARNING: VR mismatch in element (0028,0106)
++ DICOM WARNING: file i00001.CFMRI.1 has Window tags; setenv AFNI_DICOM_WINDOW YES to enforce them

Fatal Signal 11 (SIGSEGV) received
mri_read_dicom
mri_read_file
T3D_read_images
to3d:main
Bottom of Debug Stack
** AFNI version = AFNI_2007_05_29_1644 Compile date = May 30 2007
** Program Abort **

I was using an older version AFNI_2006_06_30_1332 and it had no problems. Does anyone know what caused the program to crash and what the solution is?
Thanks a lot. -Kun

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Subject Author Posted

to3d error on GE 14M4 dicom files

Kun September 06, 2007 06:29PM

Re: to3d error on GE 14M4 dicom files

rick reynolds September 06, 2007 07:49PM

Re: to3d error on GE 14M4 dicom files

Kun September 10, 2007 02:15PM

Re: to3d error on GE 14M4 dicom files

bob cox September 10, 2007 02:35PM