AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
September 21, 2007 11:36AM
Hi Julien,

Note that afni needs to start first, and may need
some time to get started. Here is a sample script
that we use in class. Maybe it will be of help.

This is run from the AFNI_data1/EPI_manyruns
directory, from the class data (if you have that).

- rick

----------------------------------------------------------------------------
#!/bin/tcsh

# demo real-time data acquisition and motion detection with afni

# use environment variables in lieu of running the RT Options plugin
setenv AFNI_REALTIME_Registration 3D:_realtime
setenv AFNI_REALTIME_Graph Realtime

if ( ! -d afni ) mkdir afni
cd afni

afni -rt &

sleep 5

cd ..
echo ""
echo ""
echo ready to run Dimon
echo -n press enter to proceed...
set stuff = $<

Dimon -rt -use_imon -start_dir 001 -pause 200
----------------------------------------------------------------------------

Subject Author Posted

Dimon

julien September 11, 2007 02:36PM

Re: Dimon

rick reynolds September 12, 2007 12:23PM

Re: Dimon

julien September 18, 2007 04:32PM

Re: Dimon

julien September 21, 2007 10:51AM

Re: Dimon

rick reynolds September 21, 2007 11:36AM

Re: Dimon

julien September 21, 2007 01:42PM

Re: Dimon

julien September 21, 2007 02:33PM