Hi all,
I'm converting some oblique EPI Siemens Dicom images using dimon and to3D. I didn't collect the data myself, but to my knowledge, all data was collected using the same parameters. Conversion works perfectly on all but two sets of data where I get the following error from to3d:
++ to3d: AFNI version=AFNI_2007_05_29_1644 (Jun 15 2007) [32-bit]
++ Authored by: RW Cox
*+ WARNING: TR expressed in milliseconds will be converted to TR=2.100000s
++ Counting images:
Fatal Signal 11 (SIGSEGV) received
mri_imcount_dicom
mri_imcount
T3D_read_images
to3d:main
Bottom of Debug Stack
my dimon command is:
dimon -infile_prefix _.MR._ -dicom_org -save_file_list dicom_order -quit
my to3d command is:
to3d -epan -prefix data_raw.nii -time:zt 36 200 2100 alt+z -@ < dicom_order
I've checked the number of IMA files and the order specified in the dicom_order list and both seem fine. Any ideas?
Version AFNI_2007_05_29_1644
[[Precompiled binary macosx_10.4_Intel: Jun 15 2007]]
Thanks a million,
Clare