AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
January 04, 2008 02:56PM
I'll see you in a few weeks then, when Gang can explain
this in more detail (unless we skip that class, not sure).

As a rule of thumb, never 'source' a script unless you
really want to modify your current environment. Since
the @analyze_ht03 script is a tcsh script, you can run
it via:

tcsh @analyze_ht03

or preferably, let the top line of the script dictate
the language, and run via:

./@analyze_ht03

On top of that, the script uses contrasts under the
ht03/contrasts directory. Either get that tree, or edit
the script not to use the contrasts (implies messing with
the awk command, too).

Note that you can get all that data from:

wget [afni.nimh.nih.gov]

As a side note, the other class directory is AFNI_data4,
both of which we will use in Princeton.

---

If you have already collected your data, there is little
to gain by this, except as an exercise. The purpose is
to try a variety of stimulus timing patterns, and choose
one with relatively good statistical power.

- rick

Subject Author Posted

3dDeconvolve - no data option

Mona January 03, 2008 05:11PM

Re: 3dDeconvolve - no data option

rick reynolds January 04, 2008 10:00AM

Re: 3dDeconvolve - no data option

Mona January 04, 2008 11:11AM

Re: 3dDeconvolve - no data option

rick reynolds January 04, 2008 11:21AM

Re: 3dDeconvolve - no data option

Mona January 04, 2008 12:12PM

Re: 3dDeconvolve - no data option

rick reynolds January 04, 2008 01:26PM

Re: 3dDeconvolve - no data option

Mona January 04, 2008 02:31PM

Re: 3dDeconvolve - no data option

rick reynolds January 04, 2008 02:56PM