AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
Matthew Hoptman
January 16, 2008 10:10AM
Hi Rick,
-debug 2 wasn't that informative. I used -debug 4

Here's the output:
Version AFNI_2007_05_29_1644
[[Precompiled binary linux_glibc22: Jan 11 2008]]

0 0 0 0 0 0 0 0
3 1 1 1 0 0 0 0
nh_fields: 43 fields:
name size len offset type
------------------- ---- --- ------ --------------
sizeof_hdr 4 1 0 DT_INT32
data_type 1 10 4 NT_DT_STRING
db_name 1 18 14 NT_DT_STRING
extents 4 1 32 DT_INT32
session_error 2 1 36 DT_INT16
regular 1 1 38 NT_DT_STRING
dim_info 1 1 39 DT_INT8
dim 2 8 40 DT_INT16
intent_p1 4 1 56 DT_FLOAT32
intent_p2 4 1 60 DT_FLOAT32
intent_p3 4 1 64 DT_FLOAT32
intent_code 2 1 68 DT_INT16
datatype 2 1 70 DT_INT16
bitpix 2 1 72 DT_INT16
slice_start 2 1 74 DT_INT16
pixdim 4 8 76 DT_FLOAT32
vox_offset 4 1 108 DT_FLOAT32
scl_slope 4 1 112 DT_FLOAT32
scl_inter 4 1 116 DT_FLOAT32
slice_end 2 1 120 DT_INT16
slice_code 1 1 122 DT_INT8
xyzt_units 1 1 123 DT_INT8
cal_max 4 1 124 DT_FLOAT32
cal_min 4 1 128 DT_FLOAT32
slice_duration 4 1 132 DT_FLOAT32
toffset 4 1 136 DT_FLOAT32
glmax 4 1 140 DT_INT32
glmin 4 1 144 DT_INT32
descrip 1 80 148 NT_DT_STRING
aux_file 1 24 228 NT_DT_STRING
qform_code 2 1 252 DT_INT16
sform_code 2 1 254 DT_INT16
quatern_b 4 1 256 DT_FLOAT32
quatern_c 4 1 260 DT_FLOAT32
quatern_d 4 1 264 DT_FLOAT32
qoffset_x 4 1 268 DT_FLOAT32
qoffset_y 4 1 272 DT_FLOAT32
qoffset_z 4 1 276 DT_FLOAT32
srow_x 4 4 280 DT_FLOAT32
srow_y 4 4 296 DT_FLOAT32
srow_z 4 4 312 DT_FLOAT32
intent_name 1 16 328 NT_DT_STRING
magic 1 4 344 NT_DT_STRING
nim_fields: 63 fields:
name size len offset type
------------------- ---- --- ------ --------------
ndim 4 1 0 DT_INT32
nx 4 1 4 DT_INT32
ny 4 1 8 DT_INT32
nz 4 1 12 DT_INT32
nt 4 1 16 DT_INT32
nu 4 1 20 DT_INT32
nv 4 1 24 DT_INT32
nw 4 1 28 DT_INT32
dim 4 8 32 DT_INT32
nvox 4 1 64 DT_INT32
nbyper 4 1 68 DT_INT32
datatype 4 1 72 DT_INT32
dx 4 1 76 DT_FLOAT32
dy 4 1 80 DT_FLOAT32
dz 4 1 84 DT_FLOAT32
dt 4 1 88 DT_FLOAT32
du 4 1 92 DT_FLOAT32
dv 4 1 96 DT_FLOAT32
dw 4 1 100 DT_FLOAT32
pixdim 4 8 104 DT_FLOAT32
scl_slope 4 1 136 DT_FLOAT32
scl_inter 4 1 140 DT_FLOAT32
cal_min 4 1 144 DT_FLOAT32
cal_max 4 1 148 DT_FLOAT32
qform_code 4 1 152 DT_INT32
sform_code 4 1 156 DT_INT32
freq_dim 4 1 160 DT_INT32
phase_dim 4 1 164 DT_INT32
slice_dim 4 1 168 DT_INT32
slice_code 4 1 172 DT_INT32
slice_start 4 1 176 DT_INT32
slice_end 4 1 180 DT_INT32
slice_duration 4 1 184 DT_FLOAT32
quatern_b 4 1 188 DT_FLOAT32
quatern_c 4 1 192 DT_FLOAT32
quatern_d 4 1 196 DT_FLOAT32
qoffset_x 4 1 200 DT_FLOAT32
qoffset_y 4 1 204 DT_FLOAT32
qoffset_z 4 1 208 DT_FLOAT32
qfac 4 1 212 DT_FLOAT32
qto_xyz 4 16 216 DT_FLOAT32
qto_ijk 4 16 280 DT_FLOAT32
sto_xyz 4 16 344 DT_FLOAT32
sto_ijk 4 16 408 DT_FLOAT32
toffset 4 1 472 DT_FLOAT32
xyz_units 4 1 476 DT_INT32
time_units 4 1 480 DT_INT32
nifti_type 4 1 484 DT_INT32
intent_code 4 1 488 DT_INT32
intent_p1 4 1 492 DT_FLOAT32
intent_p2 4 1 496 DT_FLOAT32
intent_p3 4 1 500 DT_FLOAT32
intent_name 1 16 504 NT_DT_STRING
descrip 1 80 520 NT_DT_STRING
aux_file 1 24 600 NT_DT_STRING
fname 4 1 624 NT_DT_CHAR_PTR
iname 4 1 628 NT_DT_CHAR_PTR
iname_offset 4 1 632 DT_INT32
swapsize 4 1 636 DT_INT32
byteorder 4 1 640 DT_INT32
data 4 1 644 NT_DT_POINTER
num_ext 4 1 648 DT_INT32
ext_list 4 1 652 NT_DT_EXT_PTR


Do I need to compile from sources?
Subject Author Posted

problem reading NIFTI_GZ filetype?

Matthew Hoptman January 14, 2008 04:01PM

Re: problem reading NIFTI_GZ filetype?

Daniel Glen January 14, 2008 04:11PM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 14, 2008 04:15PM

Re: problem reading NIFTI_GZ filetype?

Daniel Glen January 14, 2008 04:18PM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 14, 2008 04:22PM

Re: problem reading NIFTI_GZ filetype?

Daniel Glen January 14, 2008 04:25PM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 14, 2008 04:36PM

Re: problem reading NIFTI_GZ filetype?

Daniel Glen January 14, 2008 04:53PM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 14, 2008 04:59PM

Re: problem reading NIFTI_GZ filetype?

rick reynolds January 14, 2008 10:10PM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 16, 2008 10:10AM

Re: problem reading NIFTI_GZ filetype?

rick reynolds January 16, 2008 10:42AM

Re: problem reading NIFTI_GZ filetype?

rick reynolds January 16, 2008 10:55AM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 16, 2008 11:25AM

Re: problem reading NIFTI_GZ filetype?

rick reynolds January 16, 2008 11:35AM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 16, 2008 11:54AM

Re: problem reading NIFTI_GZ filetype?

rick reynolds January 16, 2008 12:07PM

Re: problem reading NIFTI_GZ filetype?

Matthew Hoptman January 22, 2008 08:50AM