Dear AFNI expert,
I collected 7-min resting-state fMRI data, and I would like to look at some functional connectivity.
I am using Gang Chen’s guide [
afni.nimh.nih.gov]
Before I run “3dSynthesize”, I need to run 3dDeconvolve.
With the resting-state fMRI data “RestState+orig” in hand, could you show me how to set up the “3dDeconvolve”?
In the suggested
“3dSynthesize -cbucket CbucketFileFrom3dDeconvolve+orig -matrix x1DFrom3dDeconvolve -select ... prefix EffectsOfNoInterest”
What should I select for the “…” after the “-select” option?
Thank you very much.
-- David