Hi Gang -
I'm attempting to run 3dLME on a 2 Response Types X 2 Emotions X 2 Groups ANOVA (plus random subject factor).
I've resampled all the files to 3 X 3 X 3. I'm using input files with only 1 subbrik. None of my factors have only numbers.
Here is my model.txt below. There are more subjects but for brevity I have only included two. When I use all subjects, it takes longer and there are more numbers but the error is the same.
volume
groupANOVA
MASK:
Response*Emotion*Group
COV:
SavedForRandomEffects
GoT-GoC
Go*0*Test-Go*0*Control
NoGoT-NoGoC
NoGo*0*Test-NoGo*0*Control
FearT-FearC
0*Fear*Test-0*Fear*Control
NeutralT-NeutralC
0*Neutral*Test-0*Neutral*Control
FgoT-FgoC
Go*Fear*Test-Go*Fear*Control
FngT-FngC
NoGo*Fear*Test-NoGo*Fear*Control
NgoT-NgoC
Go*Neutral*Test-Go*Neutral*Control
NngT-NngC
NoGo*Neutral*Test-NoGo*Neutral*Control
......
Subj Response Emotion Group InputFile
A11 Go Fear Test /sub_folders/A11/afnicombo/A11_333_Go_Fear_stats+tlrc
A11 NoGo Neutral Test /sub_folders/A11/afnicombo/A11_333_NoGo_Neutral_stats+tlrc
A11 Go Neutral Test /sub_folders/A11/afnicombo/A11_333_Go_Neutral_stats+tlrc
A11 NoGo Fear Test /sub_folders/A11/afnicombo/A11_333_NoGo_Fear_stats+tlrc
A41 Go Fear Control /sub_folders/A41/afnicombo/A41_333_Go_Fear_stats+tlrc
A41 NoGo Neutral Control /sub_folders/A41/afnicombo/A41_333_NoGo_Neutral_stats+tlrc
A41 Go Neutral Control /sub_folders/A41/afnicombo/A41_333_Go_Neutral_stats+tlrc
A41 NoGo Fear Control /sub_folders/A41/afnicombo/A41_333_NoGo_Fear_stats+tlrc
......
I've attached the output file (which was run with 37 subjects) but the main error is:
Error in if (ext == "head") { : argument is of length zero
Calls: read.AFNI
Execution halted
Any help you could give me would be really appreciated. I've tried working on this for a while, with no luck.
Thanks,
Alex