AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Graham Wideman
April 30, 2008 12:40PM
Gang:

We are seeing afni (GUI) and to3D both failing to get wildcard lists of files.

Details:

Afni distribution of 2006-12-06, running on Centos 5 (also tried other machines running Centos 4 and Red Hat ancient, same results).

1. afni GUI:
cd to directory containing afni volumes. Launch afni, no args. Message says
"Couldn't open [dir] as session or dataset".

This fails for dirs located on our file server, which is:

-- accessed via NFS

-- is a Mac XServe, updated three days ago from OS-X 10.3.9 to 10.5, and is probably the salient change.

What succeeds is:

a: ls listing of directory involved, OR

b. Run afni with arg to specify volume to load explicitly (on server). OR

c: cd to local dir with afni vols, and launch afni with no args.

2. to3D fails for input files on server when given wildcard arg.

All of this worked pre upgrade of OS-X

-----------------

So, it looks liks something has changed such that MCW_file_expand no longer finds anything, even though the files are there and afni can retrieve them, and ls can see them. I've not yet probed into that function enough to understand what it's doing, so currently I'm a little stuck.

Any clues or suggestions for further testing or logs to check?

Thanks, Graham
Subject Author Posted

afni, to3D, failing; apparent MCW_file_expand issue

Graham Wideman April 30, 2008 12:40PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

rick reynolds April 30, 2008 01:07PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

Graham Wideman April 30, 2008 01:42PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

bob cox April 30, 2008 02:16PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

Graham Wideman April 30, 2008 02:31PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

bob cox April 30, 2008 03:30PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

Graham Wideman April 30, 2008 03:48PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

bob cox April 30, 2008 04:16PM

Re: afni, to3D, failing; apparent MCW_file_expand issue

Graham Wideman April 30, 2008 10:42PM