AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Prantik Kundu
October 21, 2008 10:47AM
Hi Guys,

I have data in the Siemens mosaic format, where each file from the scanner contains a full volume (as opposed to a slice).

When I try to do a 3dvolreg -tshift 0 it tells me that there is no slice timing data, and that makes sense since the raw data are volumes.

So is the mosaic data slice-time corrected? If not, I should slice time correct it, right? If so, how can I do it?

-Prantik
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siemens mosaic to3d and slice time correction

Prantik Kundu October 21, 2008 10:47AM

Re: siemens mosaic to3d and slice time correction

Prantik Kundu October 21, 2008 11:52AM