AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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November 11, 2008 02:41AM
hi, bob:

my 3dDeconvolve program is as follows:

3dDeconvolve -input calc+orig -polort A -censor censor.1D -mask mask0+orig -num_stimts 4 -stim_file 1 nhl.1D -stim_label 1 nhl -stim_minlag 1 0 -stim_maxlag 1 19 -stim_file 2 nhs.1D -stim_label 2 nhs -stim_minlag 2 0 -stim_maxlag 2 19 -stim_file 3 hl.1D -stim_label 3 hl -stim_minlag 3 0 -stim_maxlag 3 19 -stim_file 4 hs.1D -stim_label 4 hs -stim_minlag 4 0 -stim_maxlag 4 19 -num_glt 4 -glt_label 1 nhl-nhs -gltsym 'SYM: +nhl -nhs' -glt_label 2 hl-hs -gltsym 'SYM: +hl -hs ' -glt_label 3 nhl-hl -gltsym 'SYM: +nhl -hl' -glt_label 4 nhs-hs -gltsym 'SYM: +nhs -hs' -iresp 1 nhl.irf -iresp 2 nhs.irf -iresp 3 hl.irf -iresp 4 hs.irf -tshift -fout -tout -errts erro -bucket epi.bucket

there are one thing different to the manu, I don't ".mat" , instead I use 4 "XX.1D" files.In "xx.1D" all non-task TRs are setting to 1, task TRs are 0.

when I change "-stim_maxlag x 19" to"-stim_maxlag 1 5", program is running successfully, I don't know is this change correct?


best.

layne
Subject Author Posted

about GOFORIT

layne November 10, 2008 09:25PM

Re: about GOFORIT

bob cox November 10, 2008 09:35PM

Re: about GOFORIT

layne November 11, 2008 02:41AM