AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
December 19, 2008 07:02PM
Hello AFNIers,
I have a quick question about setting up contrasts using the -aBcontr function in 3dAVOVA3. I have a 3x3 ANOVA design, and I would like to test for the effects of the first variable at the first level of the second.

This would be a contrast of:
1 0 -1
1 -2 1

or some version of that.

I can set up two separate -aBcontr lines:
-aBcontr 1 0 -1 : 1 con1 \
-aBcontr 1 -2 1: 1 con2 \

but that is not necessarily what I want. I would like to estimate each simultaneously. Is there a way of setting up the contrast [1 0 -1; 1 -2 1] : 1?

This will also be useful for tricking AFNI into larger designs (such as a 5 way ANOVA).

Best,
Wil
Subject Author Posted

3dANOVA3 -aBcontr w/ 3 levels

Wil Cunningham December 19, 2008 07:02PM

Re: 3dANOVA3 -aBcontr w/ 3 levels

Gang Chen December 20, 2008 02:08PM

Re: 3dANOVA3 -aBcontr w/ 3 levels

Wil Cunningham December 20, 2008 02:26PM

Re: 3dANOVA3 -aBcontr w/ 3 levels

Wil Cunningham December 20, 2008 02:31PM

Re: 3dANOVA3 -aBcontr w/ 3 levels

Gang Chen December 20, 2008 04:27PM

Re: 3dANOVA3 -aBcontr w/ 3 levels

Wil Cunningham December 20, 2008 04:32PM