Hi,
I've segmented an image (a brain's structure) with two completely different methods (different packages). I want to compute the dice overlap of the segmented images. I have the reference manually segmented image. I am using 3dOverlap to compute dice. The result of 3Doverlap is zero. When I see the images with a package, it seems that the orientation of the images are different (the structure location is different in two images). How can I fix this problem?
Siamak