AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Daniel Glen
January 14, 2009 03:30PM
Two ways. The simplest is to just use the threshold slider in the GUI and raise it up until only values of 15 remain in the overlay/threshold. Because that is also the maximum value for this dataset, no other combinations will be shown.

The second way would be to use 3dcalc to limit the values to 15 or change your original 3dcalc function to require all to be true to get a non-zero value of 1 (any values that do not meet the threshold test are zero and change the product to zero also).

3dcalc -a cond_mask2+orig -expr 'equals(a,15)' -prefix alltrue

or

3dcalc -a 'LC_groupANOVA_torland_new2+tlrc[3]' -b 'LC_groupANOVA_torland_new2+tlrc[5]' -c 'LC_groupANOVA_torland_new2+tlrc[7]' -d 'LC_groupANOVA_torland_new2+tlrc[9]' -expr 'step(a-4.2) * step(b-4.2)* step(c-4.2) * step(d-4.2)' -prefix alltrue
Subject Author Posted

Conjunction Analysis - help requested

Marnie January 12, 2009 01:40PM

Re: Conjunction Analysis - help requested

Daniel Glen January 12, 2009 03:32PM

Re: Conjunction Analysis - help requested

Marnie January 13, 2009 01:15PM

Re: Conjunction Analysis - help requested

Daniel Glen January 13, 2009 01:26PM

Re: Conjunction Analysis - help requested

Marnie January 13, 2009 01:34PM

Re: Conjunction Analysis - help requested

Marnie January 14, 2009 01:15PM

Re: Conjunction Analysis - help requested

Daniel Glen January 14, 2009 03:30PM