AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 26, 2009 11:56AM
Okay, so there are 5 CONDITIONs that each subject completes:

Stop
UpLeft
UpRight
DownLeft
DownRight

I would like to examine a couple of contrasts here:

(UpLeft +UpRight + DownLeft + DownRight) > Stop
(UpLeft + UpRight) > (DownLeft + DownRight)
(UpLeft + DownLeft) > Stop

Then I would like to examine whether the differences in these contrasts vary over GROUP at the two applicable timepoints after treatment (Immediate and 6Month), for instance:

Controls((UpLeft + DownLeft) > Stop) > Patients((UpLeft + DownLeft) > Stop)

Then I would like to do a GROUP x TIME interaction effect for the contrasts listed above (Including the 6Week scan that the Patients got but the Controls didn't?).

Then I would like to look within the Patient group to try and characterize a timecourse of recovery from treatment, asking specifically if the change is linear over time after treatment:

Patient-Immediate(SomeContrast) > Patient-6Week(SomeContrast) > Patient-6Month(SomeContrast)

Besides these, I'm sure I could come up with plenty of other meaningful contrasts... but these are the specific hypotheses.

Thankyou for your help! I'm not THAT scared of R, by the way... if I should be doing this in R, that's okay, but some help on how to set it up would be awesome.

You guys are the best.
-Daniel
Subject Author Posted

A rather painful study design...

Daniel Schwartz January 23, 2009 05:54PM

Re: A rather painful study design...

Gang Chen January 25, 2009 12:21PM

Re: A rather painful study design...

Daniel Schwartz January 26, 2009 11:56AM

Re: A rather painful study design...

Gang Chen January 26, 2009 01:03PM