AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Colm Connolly
May 25, 2009 08:17AM
The @auto_tlrc script should produce a HEAD/BRIK file pair of your transformed orig space data. To convert it to NIfTI you can use 3dcopy or 3dAFNItoNIFTI which will allow you to automate the conversion to NIFTI format from HEAD/BRIK.

for example:

@auto_tlrc -base TT_icbm452+tlrc -input anat+orig.HEAD

will produce anat_at+tlrc.{HEAD,BRIK}

to convert to NIFTI

3dcopy anat_at+tlrc. anatAsNIFTI.nii

will produce a NIFTI version of anat_at+tlrc.
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Subject Author Posted

how to get an explicit copy of tlrc data

Tie-qiang Li May 25, 2009 06:47AM

Re: how to get an explicit copy of tlrc data

Colm Connolly May 25, 2009 08:17AM