AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
June 04, 2009 01:43PM
Hi Vincent,

If your AFNI version isn't too old, the 3dDeconvolve output should
come with details on the error. In any case, you might consider
this thread, found by a "misfit error" search:

[afni.nimh.nih.gov]
[afni.nimh.nih.gov]

Here is the 3dDeconvolve output, if you don't have it:

*+ WARNING: ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
*+ WARNING: stats.+tlrc[9] scale to shorts mean misfit error = 5.2% -- * Caution
+ a) Numerical precision has been lost when truncating results
from 32-bit floating point to 16-bit integers (shorts).
+ b) Consider writing datasets out in float format.
In most AFNI programs, use the '-float' option.
+ c) This warning is a new message, but is an old issue
that arises when storing results in an integer format.
+ d) Don't panic! These messages likely originate in peripheral
or unimportant voxels. They mean that you must examine your output.
"Assess the situation and keep a calm head about you,
because it doesn't do anybody any good to panic."
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++

- rick

Subject Author Posted

3dDeconvolve.err

Vincent Costa June 04, 2009 01:23PM

Re: 3dDeconvolve.err

rick reynolds June 04, 2009 01:43PM

Re: 3dDeconvolve.err

Vincent Costa June 04, 2009 02:04PM

Re: 3dDeconvolve.err

rick reynolds June 04, 2009 02:26PM