Hello Gang,

This is right, thank you. It seems to be because I removed the transpose sign ('/) after SEED_Neur_C3_5392.1D etc. in the 1deval command step. Otherwise I am told that the G"i?"Acoding (where condition A is coded with 1s) is too short. This problem persists even when I add a line at the end of the GAcoding files.

I saw on the message board that this may signal that one of the input files needs to be transposed. When I transpose the Acoding as well, deconvolution works fine.

1deval -a SEED_Neur_C3_5392.1D\' -b G1Acoding.txt\' -expr 'a*b' > Inter_neu_C3_A_5392.1D

However, there is something I do not understand. When I use the AvsBcoding input file (to compare two conditions), I do not need to transpose the condition marker .1D file. However, when I have the Acoding alone, it needs to be done. Why is this the case? Both the AvsB and the Acoding are .1D files.

All the best,
Jana