AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 16, 2009 01:57PM

Dear Daniel,

Thanks for the quick and helpful reply.

I'm still not quite there yet...It turns out I had to set SCENE_DATA(2) = 11, because it did not like the t-statistic option (i got the same two error messages as before:
DATASET error: function type missing auxilliary statistical data
DATASET error: illegal time-dependent dataset and func_type combination!)

(and of course i changed InfoDelOut.BRICK_STATAUX = [0 11 1 DF])

Now the dataset reads into AFNI ok, but the values are all wrong (autoRange goes to 32700). So now i suspect it's because i specified the data as short (InfoDelOut.BRICK_TYPES = [1]), however, my matrix matp is a double. WriteBrik does not yet support double, and I can't convert double to float or short in matlab (at least i cannot find out how to do this). Is this the problem?

One last thing: what does the degrees of freedom refer to in my case? My matrix is 64x64, which i want to be an overlay onto one slice. The functional data contains 259 timepts.

Thanks again,
cnan
Subject Author Posted

WriteBrik

cnan June 16, 2009 09:54AM

Re: WriteBrik

Daniel Glen June 16, 2009 12:18PM

Re: WriteBrik

cnan June 16, 2009 01:57PM

Re: WriteBrik

Judd June 16, 2009 02:24PM

Re: WriteBrik

Daniel Glen June 16, 2009 04:44PM

Re: WriteBrik: OK now

cnan June 17, 2009 03:59AM

Re: WriteBrik: how to write multiple slices?

cnan June 17, 2009 05:42AM

Re: WriteBrik: how to write multiple slices?

Nick Oosterhof June 17, 2009 10:07AM

Re: WriteBrik: how to write multiple slices?

cnan June 17, 2009 10:26AM

Re: WriteBrik: how to write multiple slices?

Nick Oosterhof June 17, 2009 10:58AM

Re: WriteBrik: how to write multiple slices?: OK

cnan June 18, 2009 06:40AM

Re: WriteBrik: how to write multiple slices?: OK

Nick Oosterhof June 18, 2009 07:21AM

Re: WriteBrik: how to write multiple slices?: OK

cnan June 18, 2009 07:55AM