AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 18, 2009 01:02PM
Hi Rick,

Yes. That is what I mean to do.
About " how many TRs needed to censor" will be dependent on the result from the 3dtoutcount. Based on my experience, there will be around 10 TRs needed to be removed from 200 TR runs.

For rat BOLD-fMRI, the major problem is not from the motion, rather from the very variable physiology (blood pressure, anesthesia leverl related alertness, and the blood gas contents).

best

Xin

Subject Author Posted

3dcalc and -censor for averaging

xin yu June 18, 2009 10:04AM

Re: 3dcalc and -censor for averaging

rick reynolds June 18, 2009 10:24AM

Re: 3dcalc and -censor for averaging

Daniel Glen June 18, 2009 11:29AM

Re: about censorbricks.sh

xin yu June 18, 2009 02:13PM

Re: 3dcalc and -censor for averaging

xin yu June 18, 2009 01:02PM

Re: 3dcalc and -censor for averaging

Daniel Glen June 18, 2009 02:42PM

Re: 3dcalc and -censor for averaging

Xin Yu June 19, 2009 05:16PM