AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Frank Skidmore
June 30, 2009 04:11PM
I apologize in advance for a basic question.

In converting from DICOM to .BRIK files for functional imaging, I have been using the command:

to3d –prefix [filename].trega –time:tz [# of time-points][# of slices] [TR #] seq+z IM*

This works well when all the functional image files are in one directory, but does not work for longer runs when there are multiple directories containing the functional imaging files that have to be sequentially read.

Suggestions on an appropriate command to use from a maven would be most welcome and very appreciated.

Frank Skidmore
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Batching of Directories for BRIK files

Frank Skidmore June 30, 2009 04:11PM

Re: Batching of Directories for BRIK files

bob cox June 30, 2009 04:33PM