AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Daniel Glen
July 10, 2009 12:20PM
Although we are not experts in MRIcro, we did answer a similar question a couple years ago. Basically, either use the newer MRIcron software that supports NIFTI format or convert to short integers using 3dcalc and convert in AFNI. If you choose to use the MRIcron software instead, you can save datasets as NIFTI format in almost all AFNI programs easily using something like this:

3dcopy dset+orig dset.nii
or
3dAFNItoNIFTI dset+orig # this command will create a new NIFTI dataset dset.nii
or
3dcalc -a dset+orig -prefix dset.nii -expr a

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Mricro convert

son July 09, 2009 08:14PM

Re: Mricro convert

Daniel Glen July 10, 2009 12:20PM