AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Alice
September 09, 2009 05:32PM

I used the 3dDeconvolve function before to create Decon datasets from the deconvolution-- however, the past few times I've used 3dDeconvolve, it hasn't been generating the Decon datasets.

Are there any particular specifications that will allow the generation of the Decon dataset--?

My command:

3dDeconvolve -input alicefunc2_scale+orig.HEAD -polort 2 -force_TR 1.5 -mask alicefunc2_automask+orig -basis_normall 1 -num_stimts 8 -stim_times 1 left.1D 'TENT(0,10,8)' -stim_label 1 leftstim -stim_times 2 right.1D 'TENT(0,10,8)' -stim_label 2 rightstim -stim_file 3 dfile_alicefunc2.1D'[0]' -stim_base 3 -stim_label 3 roll -stim_file 4 dfile_alicefunc2.1D'[1]' -stim_base 4 -stim_label 4 pitch -stim_file 5 dfile_alicefunc2.1D'[2]' -stim_base 5 -stim_label 5 yaw -stim_file 6 dfile_alicefunc2.1D'[3]' -stim_base 6 -stim_label 6 dS -stim_file 7 dfile_alicefunc2.1D'[4]' -stim_base 7 -stim_label 7 dL -stim_file 8 dfile_alicefunc2.1D'[5]' -stim_base 8 -stim_label 8 dP -iresp 1 left_iresp_d -iresp 2 right_iresp_d -fout -tout -full_first -x1D Xmat.x1D -fitts fitts_d -bucket stats_sample
Subject Author Posted

Decon dataset from 3dDeconvolve?

Alice September 09, 2009 05:32PM

Re: Decon dataset from 3dDeconvolve?

rick reynolds September 09, 2009 05:55PM

Re: Decon dataset from 3dDeconvolve?

Alice September 09, 2009 06:16PM