AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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Daniel Glen
October 30, 2009 08:55AM
You could add this on to Rick's script to use imcat to make a montage of the three JPEG images:

imcat -prefix threeviews \
-matrix 3 1 -rgb_out "axialimage axial.$cindex.$thresh.jpg" \
"coronalimage cor.$cindex.$thresh.jpg" \
"sagittalimage sag.$cindex.$thresh.jpg"
cjpeg -quality 91 threeviews.$cindex.$thresh.ppm > threeviews.$cindex.$thresh.jpg

Alternatively, ImageMagick has tools to capture windows by name and make montages. Take a look at this previous posting:

[afni.nimh.nih.gov]
Subject Author Posted

brain pics in 3 orientations in one image file

Emily October 29, 2009 06:17PM

Re: brain pics in 3 orientations in one image file

rick reynolds October 29, 2009 09:04PM

Re: brain pics in 3 orientations in one image file

Daniel Glen October 30, 2009 08:55AM