AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Mike Beauchamp
October 30, 2009 05:54PM
We have a Philips scanner. Each DICOM image contains a single slice. The slices are in "tz" order; e.g. if there are 10 slices and 100 time points
image IM_0001 to IM_0100 is all time points of the first slice, IM_0101 to IM_0200 is all time points of the second slice, etc. Put another way,
to3d -prefix CDr1 -time:tz 100 10 2000 alt+z IM_* 00000001/IM_* 00000002/IM_*

When I attempt to feed these same slices to real-time afni with Dimon, Dimon only reads a single slice. afni pops-up a message which seems to indicate that Dimon is reading the header of the first image file (which correctly states that the file contains a single slice) and tells AFNI to construct a dataset with only one slice.
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Subject Author Posted

Dimon question

Mike Beauchamp October 30, 2009 04:53PM

Re: Dimon question

rick reynolds October 30, 2009 05:00PM

Re: Dimon question

Mike Beauchamp October 30, 2009 05:54PM

Re: Dimon question

rick reynolds October 30, 2009 07:25PM