AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 11, 2009 11:20AM
Hi Gang,

I noticed that whenever a hybrid theta equation matrix (0,1,and 2s) is specified for 1dSEM using tree or forest growth approaches that Bollen's parsimonious index (BFI) is always negatively valued and becomes increasing negatively valued with successive iterations.

It seems to me that this is a bug in 1dSEM since it calculates BFI using the chi square for the nuclear model (where 1s are specified) as the the null model chi square. If you recalculate BFI using the true null model, in other words with all parameters set to 0, BFI inverts its sign, achieves reasonable values, and asymptotes over successive iterations. Also the BFI for the first iteration beyond the nuclear model is relatively high .3-.5 rather than starting at zero. This is similar to the BFI plot shown in Stein et al. 2007 where they appear to be calculating BFI using the true null model at not the nuclear model

When a fully exploratory theta equation matrix of all 2s is specified BFI is correctly calculated.

Is this a bug or am I missing something here?

Vinny
Subject Author Posted

1dSEM Bollen p index for hybrid theta equation matrix

Vincent Costa December 11, 2009 11:20AM

Re: 1dSEM Bollen p index for hybrid theta equation matrix

Daniel Glen December 11, 2009 05:10PM

Re: 1dSEM Bollen p index for hybrid theta equation matrix

Vincent Costa December 11, 2009 05:49PM

Re: 1dSEM Bollen p index for hybrid theta equation matrix

bob cox December 12, 2009 11:42AM

Re: 1dSEM Bollen p index for hybrid theta equation matrix

Vincent Costa December 12, 2009 03:40PM

Re: 1dSEM Bollen p index for hybrid theta equation matrix

Vincent Costa December 12, 2009 04:11PM