AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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March 09, 2010 10:23AM
> We then report only the clusters that are significant from the t-tests and
> corresponds to the significant clusters we saw in the whole brain interaction F
> map. All the significant clusters that we report in tables have the same cluster
> thresholding value based on alphasim.
>
> Is this a good approach? or am I missing something?

Did the family-wise error correction with AlphaSim apply to the F- or t-map, or both?

> Reviewers of our paper (who seem to use SPM) are saying that t-tests should
> be not whole brain but should be done only on clusters that were significant in
> the interaction map and different p values should be given for every cluster.

I'm confused here: Do you mean the reviewers suggest that only statistical analysis at ROI level (averaged across the ROI?), but not the whole brain, is legitimate?

Gang
Subject Author Posted

examining interaction effects from whole brain anovas

Alessandra March 08, 2010 06:30PM

Re: examining interaction effects from whole brain anovas

Gang Chen March 09, 2010 10:23AM

Re: examining interaction effects from whole brain anovas

Alessandra March 09, 2010 11:15AM

Re: examining interaction effects from whole brain anovas

Gang Chen March 09, 2010 01:24PM

Re: examining interaction effects from whole brain anovas

Alessandra March 12, 2010 06:52PM

Re: examining interaction effects from whole brain anovas

Gang Chen March 15, 2010 09:27AM

Re: examining interaction effects from whole brain anovas

Alessandra March 15, 2010 11:28AM

Re: examining interaction effects from whole brain anovas

Gang Chen March 15, 2010 01:56PM

Re: examining interaction effects from whole brain anovas

Alessandra March 17, 2010 07:13PM

Re: examining interaction effects from whole brain anovas

Gang Chen March 18, 2010 01:14PM