AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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giuseppe pagnoni
November 12, 2011 05:01AM
Hello Gang,

thanks for the quick reply. If I understood it correctly, to run 1dSVAR semi-automatically, I could make a `custom' copy of the R script and substitute the actual answers for the corresponding readline() commands, right? I haven't thought about that, that seems pretty easy and it's a good occasion to get some familiarity with the code.

As for the numerical solution issue when loops are present, is this a problem even with the direct approach, in the sense that even though the program doesn't crash, its results may not valid?

As a related question, if you have a set of ROIs whose network structure you're interested in exploring (and, of course, you don't actually know a priori who's connected to whom), would you think it's a legitimate strategy to examine first the simple partial correlation matrix (using 1ddot, as suggested by Bob in a previous e-mail on the list) and then make a connection matrix for 1dSVAR where the edges to estimate (NA values) are only chosen among those that had a partial correlation coefficient significantly different from zero?

thanks again for your comments,

giuseppe
Subject Author Posted

1dSVAR questions

giuseppe pagnoni November 09, 2011 03:42PM

Re: 1dSVAR questions

Gang Chen November 10, 2011 10:06AM

Re: 1dSVAR questions

giuseppe pagnoni November 12, 2011 05:01AM

Re: 1dSVAR questions

Gang Chen November 14, 2011 11:59AM

Re: 1dSVAR questions

Anonymous User May 30, 2012 02:42PM

Re: 1dSVAR questions

gang May 30, 2012 05:31PM

Re: 1dSVAR questions

Andrew_Lynn April 25, 2015 03:00PM

Re: 1dSVAR questions

gang April 27, 2015 02:44PM

Re: 1dSVAR questions

Andrew_Lynn April 27, 2015 05:33PM

Re: 1dSVAR questions

gang April 27, 2015 06:00PM

Re: 1dSVAR questions

jkeidel May 14, 2015 06:09AM

Re: 1dSVAR questions

gang May 14, 2015 03:05PM

Re: 1dSVAR questions

jkeidel May 14, 2015 05:44PM

Re: 1dSVAR questions

Andrew_Lynn May 18, 2015 11:07AM

Re: 1dSVAR questions

jkeidel May 20, 2015 06:51AM