AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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rick reynolds
May 31, 2012 08:57PM
So this is from an afni_proc.py script?

In any case, you can apply @auto_tlrc with usage 2 to transform the
original anatomy by the matrix in the +tlrc result. For example:

@auto_tlrc -apar anat_final.SUBJ+tlrc -input SUBJ_anat+orig

Here anat_final+tlrc is the skull-stripped version in standard space, and
SUBJ_anat is the initial version with the skull. The result should be
SUBJ_anat+tlrc, still with the skull.

- rick
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Subject Author Posted

anatomy in tlrc space without skull stripped?

Han May 31, 2012 03:43PM

Re: anatomy in tlrc space without skull stripped?

ziad May 31, 2012 05:26PM

Re: anatomy in tlrc space without skull stripped?

Han May 31, 2012 07:00PM

Re: anatomy in tlrc space without skull stripped?

Han May 31, 2012 07:02PM

Re: anatomy in tlrc space without skull stripped?

rick reynolds May 31, 2012 08:57PM

Re: anatomy in tlrc space without skull stripped?

Han June 01, 2012 11:31AM

Re: anatomy in tlrc space without skull stripped?

rick reynolds June 01, 2012 09:53PM