Ok So I found the crash report hidden in Library/Logs/DiagnosticReports in case it is of use.
Process: 3dAllineate [31884]
Path: /Users/USER/*/3dAllineate
Identifier: 3dAllineate
Version: ??? (???)
Code Type: X86-64 (Native)
Parent Process: tcsh [31882]
Date/Time: 2012-07-09 14:48:47.260 -0700
OS Version: Mac OS X 10.7.4 (11E53)
Report Version: 9
Crashed Thread: 0 Dispatch queue: com.apple.main-thread
Exception Type: EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000
Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0 libsystem_kernel.dylib 0x00007fff8c11abca __psynch_cvwait + 10
1 libsystem_c.dylib 0x00007fff86335274 _pthread_cond_wait + 840
2 3dAllineate 0x0000000100001cbb omp_get_num_procs + 315
3 3dAllineate 0x0000000100001d6f omp_get_num_procs + 495
4 3dAllineate 0x0000000100001803 omp_in_parallel + 483
5 3dAllineate 0x0000000100012892 GA_interp_linear + 370
6 3dAllineate 0x0000000100015940 GA_get_warped_values + 1376
7 3dAllineate 0x000000010001a95e GA_scalar_fitter + 158
8 3dAllineate 0x00000001001ed87a calfun_ + 234
9 3dAllineate 0x00000001001f2ad6 newuob_ + 1606
10 3dAllineate 0x00000001001f4eab newuoa_ + 331
11 3dAllineate 0x00000001001ed9d4 powell_newuoa + 340
12 3dAllineate 0x000000010001b683 mri_genalign_scalar_optim + 755
13 3dAllineate 0x0000000100027496 main + 31990
14 3dAllineate 0x000000010000121c start + 52
Thread 1:
0 libsystem_kernel.dylib 0x00007fff8c11abca __psynch_cvwait + 10
1 libsystem_c.dylib 0x00007fff86335274 _pthread_cond_wait + 840
2 3dAllineate 0x0000000100001cbb omp_get_num_procs + 315
3 3dAllineate 0x0000000100001d6f omp_get_num_procs + 495
4 3dAllineate 0x00000001000017ad omp_in_parallel + 397
5 libsystem_c.dylib 0x00007fff863318bf _pthread_start + 335
6 libsystem_c.dylib 0x00007fff86334b75 thread_start + 13
Thread 0 crashed with X86 Thread State (64-bit):
rax: 0x0000000000000000 rbx: 0x00007fff7260f960 rcx: 0x00007fff5fbde6d8 rdx: 0x0000000000000000
rdi: 0x0000000100904a68 rsi: 0x0000000100000100 rbp: 0x00007fff5fbde790 rsp: 0x00007fff5fbde6d8
r8: 0x0000000000000000 r9: 0x0000000000000060 r10: 0x0000000000000000 r11: 0xffffff80002da8d0
r12: 0x0000000000000000 r13: 0x0000000100000100 r14: 0x0000000100904a88 r15: 0x0000000100904a80
rip: 0x00007fff8c11abca rfl: 0x0000000000000202 cr2: 0xffffff80a2044004
Logical CPU: 0
Binary Images:
0x100000000 - 0x1003d2ff7 +3dAllineate (??? - ???) <F3D7F15B-E8B4-2E56-B1BD-9FEA7080764E> /Users/USER/*/3dAllineate
0x100480000 - 0x1004c5fff +libXt.6.dylib (7.0.0 - compatibility 7.0.0) <ADD723CF-1632-38AA-8E24-F4FA687231A7> /usr/X11/lib/libXt.6.dylib
0x1004df000 - 0x1004edfff +libXft.2.dylib (5.0.0 - compatibility 5.0.0) <7F821F4A-7FAA-379F-9020-CC475EE3930A> /usr/X11/lib/libXft.2.dylib
0x1004f5000 - 0x10051fff7 +libfontconfig.1.dylib (6.4.0 - compatibility 6.0.0) <47E8D60F-40E3-3525-85D9-3F5EF1BB0447> /usr/X11/lib/libfontconfig.1.dylib
0x10052b000 - 0x100624ff7 +libiconv.2.dylib (8.1.0 - compatibility 8.0.0) <1B8D243B-F617-301E-97B1-EE78A72617AB> /sw/*/libiconv.2.dylib
0x100631000 - 0x100641ff7 +libXmu.6.dylib (9.0.0 - compatibility 9.0.0) <914E3F44-0674-3121-9FB0-CC0D65D304D3> /usr/X11/lib/libXmu.6.dylib
0x10064b000 - 0x100650ff7 +libXp.6.dylib (9.0.0 - compatibility 9.0.0) <D80EBBEE-A8D7-3D70-AFA5-4E0ED157B311> /usr/X11/lib/libXp.6.dylib
0x100656000 - 0x100662ff7 +libXpm.4.dylib (16.0.0 - compatibility 16.0.0) <28452AC0-B2EF-35D2-8507-9657D0C1AD5F> /usr/X11/lib/libXpm.4.dylib
0x100668000 - 0x100674fff +libXext.6.dylib (11.0.0 - compatibility 11.0.0) <9F3BCD56-2533-3CF9-A66E-1C1D1222B5D6> /usr/X11/lib/libXext.6.dylib
0x10067b000 - 0x100788fff +libX11.6.dylib (10.0.0 - compatibility 10.0.0) <FCAE2E25-89BD-3856-BD8E-E9806B321215> /usr/X11/lib/libX11.6.dylib
0x1007af000 - 0x1007b4fff +libSM.6.dylib (7.1.0 - compatibility 7.0.0) <DFBF7F32-C179-340A-8BDD-E139ABCC8E0A> /usr/X11/lib/libSM.6.dylib
0x1007b9000 - 0x1007c9fff +libICE.6.dylib (10.0.0 - compatibility 10.0.0) <9B855072-486C-3B5A-8189-0617F2FD119B> /usr/X11/lib/libICE.6.dylib
0x1007d3000 - 0x1007e4fff +libxcb.1.dylib (3.0.0 - compatibility 3.0.0) <4CC4315D-5FE8-377A-A097-68B58F333D32> /usr/X11/lib/libxcb.1.dylib
0x1007f1000 - 0x1007f2fff +libXau.6.dylib (7.0.0 - compatibility 7.0.0) <6639F5C9-BF73-3BA4-A792-D0377E4CA5D4> /usr/X11/lib/libXau.6.dylib
0x1007f6000 - 0x1007f9ff7 +libXdmcp.6.dylib (7.0.0 - compatibility 7.0.0) <776C9C4D-9528-37A0-AF28-C9F20A215A19> /usr/X11/lib/libXdmcp.6.dylib
0x1007fe000 - 0x100877fff +libfreetype.6.dylib (14.2.0 - compatibility 14.0.0) <7B77397A-3D6F-3A26-926F-786BC27E5D3C> /usr/X11/lib/libfreetype.6.dylib
0x10088e000 - 0x100894fff +libXrender.1.dylib (5.0.0 - compatibility 5.0.0) <8F88E9F2-6AA3-3432-803B-EEABB7BD3164> /usr/X11/lib/libXrender.1.dylib
0x7fff6069e000 - 0x7fff606d2baf dyld (195.6 - ???) <0CD1B35B-A28F-32DA-B72E-452EAD609613> /usr/lib/dyld
0x7fff82cab000 - 0x7fff82cb1fff libmacho.dylib (800.0.0 - compatibility 1.0.0) <D86F63EC-D2BD-32E0-8955-08B5EAFAD2CC> /usr/lib/system/libmacho.dylib
0x7fff82d58000 - 0x7fff82d93fff libsystem_info.dylib (??? - ???) <35F90252-2AE1-32C5-8D34-782C614D9639> /usr/lib/system/libsystem_info.dylib
0x7fff83119000 - 0x7fff8311afff libunc.dylib (24.0.0 - compatibility 1.0.0) <C67B3B14-866C-314F-87FF-8025BEC2CAAC> /usr/lib/system/libunc.dylib
0x7fff841ba000 - 0x7fff841ccff7 libz.1.dylib (1.2.5 - compatibility 1.0.0) <30CBEF15-4978-3DED-8629-7109880A19D4> /usr/lib/libz.1.dylib
0x7fff84936000 - 0x7fff84a2bfff libiconv.2.dylib (7.0.0 - compatibility 7.0.0) <5C40E880-0706-378F-B864-3C2BD922D926> /usr/lib/libiconv.2.dylib
0x7fff862e3000 - 0x7fff863c0fef libsystem_c.dylib (763.13.0 - compatibility 1.0.0) <41B43515-2806-3FBC-ACF1-A16F35B7E290> /usr/lib/system/libsystem_c.dylib
0x7fff863c1000 - 0x7fff86403ff7 libcommonCrypto.dylib (55010.0.0 - compatibility 1.0.0) <A5B9778E-11C3-3F61-B740-1F2114E967FB> /usr/lib/system/libcommonCrypto.dylib
0x7fff86621000 - 0x7fff8663efff libxpc.dylib (77.19.0 - compatibility 1.0.0) <9F57891B-D7EF-3050-BEDD-21E7C6668248> /usr/lib/system/libxpc.dylib
0x7fff8663f000 - 0x7fff86646fff libcopyfile.dylib (85.1.0 - compatibility 1.0.0) <172B1985-F24A-34E9-8D8B-A2403C9A0399> /usr/lib/system/libcopyfile.dylib
0x7fff86dfd000 - 0x7fff86dfeff7 libremovefile.dylib (21.1.0 - compatibility 1.0.0) <739E6C83-AA52-3C6C-A680-B37FE2888A04> /usr/lib/system/libremovefile.dylib
0x7fff87af6000 - 0x7fff87b11fff libexpat.1.dylib (7.2.0 - compatibility 7.0.0) <DDB91E75-A2FA-331F-8069-999127AC6A9D> /usr/lib/libexpat.1.dylib
0x7fff87e30000 - 0x7fff87e36ff7 libunwind.dylib (30.0.0 - compatibility 1.0.0) <1E9C6C8C-CBE8-3F4B-A5B5-E03E3AB53231> /usr/lib/system/libunwind.dylib
0x7fff88606000 - 0x7fff8860afff libdyld.dylib (195.5.0 - compatibility 1.0.0) <F1903B7A-D3FF-3390-909A-B24E09BAD1A5> /usr/lib/system/libdyld.dylib
0x7fff898bb000 - 0x7fff898c8ff7 libbz2.1.0.dylib (1.0.5 - compatibility 1.0.0) <8EDE3492-D916-37B2-A066-3E0F054411FD> /usr/lib/libbz2.1.0.dylib
0x7fff89db4000 - 0x7fff89db9fff libcompiler_rt.dylib (6.0.0 - compatibility 1.0.0) <98ECD5F6-E85C-32A5-98CD-8911230CB66A> /usr/lib/system/libcompiler_rt.dylib
0x7fff8b448000 - 0x7fff8b449fff libdnsinfo.dylib (395.11.0 - compatibility 1.0.0) <853BAAA5-270F-3FDC-B025-D448DB72E1C3> /usr/lib/system/libdnsinfo.dylib
0x7fff8b964000 - 0x7fff8b964fff libkeymgr.dylib (23.0.0 - compatibility 1.0.0) <61EFED6A-A407-301E-B454-CD18314F0075> /usr/lib/system/libkeymgr.dylib
0x7fff8b966000 - 0x7fff8b967ff7 libsystem_sandbox.dylib (??? - ???) <96D38E74-F18F-3CCB-A20B-E8E3ADC4E166> /usr/lib/system/libsystem_sandbox.dylib
0x7fff8b968000 - 0x7fff8b970fff libsystem_dnssd.dylib (??? - ???) <D9BB1F87-A42B-3CBC-9DC2-FC07FCEF0016> /usr/lib/system/libsystem_dnssd.dylib
0x7fff8b9de000 - 0x7fff8b9e3ff7 libsystem_network.dylib (??? - ???) <5DE7024E-1D2D-34A2-80F4-08326331A75B> /usr/lib/system/libsystem_network.dylib
0x7fff8c104000 - 0x7fff8c124fff libsystem_kernel.dylib (1699.26.8 - compatibility 1.0.0) <1DDC0B0F-DB2A-34D6-895D-E5B2B5618946> /usr/lib/system/libsystem_kernel.dylib
0x7fff8c26c000 - 0x7fff8c299fe7 libSystem.B.dylib (159.1.0 - compatibility 1.0.0) <095FDD3C-3961-3865-A59B-A5B0A4B8B923> /usr/lib/libSystem.B.dylib
0x7fff8c5df000 - 0x7fff8c5e9ff7 liblaunch.dylib (392.38.0 - compatibility 1.0.0) <6ECB7F19-B384-32C1-8652-2463C1CF4815> /usr/lib/system/liblaunch.dylib
0x7fff8cf08000 - 0x7fff8cf09ff7 libsystem_blocks.dylib (53.0.0 - compatibility 1.0.0) <8BCA214A-8992-34B2-A8B9-B74DEACA1869> /usr/lib/system/libsystem_blocks.dylib
0x7fff8cfef000 - 0x7fff8cff3fff libmathCommon.A.dylib (2026.0.0 - compatibility 1.0.0) <FF83AFF7-42B2-306E-90AF-D539C51A4542> /usr/lib/system/libmathCommon.A.dylib
0x7fff8d100000 - 0x7fff8d109ff7 libsystem_notify.dylib (80.1.0 - compatibility 1.0.0) <A4D651E3-D1C6-3934-AD49-7A104FD14596> /usr/lib/system/libsystem_notify.dylib
0x7fff8e69c000 - 0x7fff8e6aafff libdispatch.dylib (187.9.0 - compatibility 1.0.0) <1D5BE322-A9B9-3BCE-8FAC-076FB07CF54A> /usr/lib/system/libdispatch.dylib
0x7fff8e81d000 - 0x7fff8e81ffff libquarantine.dylib (36.6.0 - compatibility 1.0.0) <0EBF714B-4B69-3E1F-9A7D-6BBC2AACB310> /usr/lib/system/libquarantine.dylib
0x7fff8eb94000 - 0x7fff8eb99fff libcache.dylib (47.0.0 - compatibility 1.0.0) <B7757E2E-5A7D-362E-AB71-785FE79E1527> /usr/lib/system/libcache.dylib
External Modification Summary:
Calls made by other processes targeting this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by this process:
task_for_pid: 0
thread_create: 0
thread_set_state: 0
Calls made by all processes on this machine:
task_for_pid: 38818
thread_create: 1
thread_set_state: 0
VM Region Summary:
ReadOnly portion of Libraries: Total=59.4M resident=30.6M(52%) swapped_out_or_unallocated=28.8M(48%)
Writable regions: Total=493.7M written=459.7M(93%) resident=462.3M(94%) swapped_out=0K(0%) unallocated=31.4M(6%)
REGION TYPE VIRTUAL
=========== =======
MALLOC 484.7M
MALLOC guard page 32K
STACK GUARD 56.0M
Stack 8712K
VM_ALLOCATE 4K
__DATA 1100K
__LINKEDIT 48.6M
__TEXT 10.9M
shared memory 12K
=========== =======
TOTAL 609.7M
