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Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
History of AFNI updates
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Of course! Thank you so much for your help, have a great week end!
Best,
Laura
by
Laura Verga
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AFNI Message Board
Hi Rick,
Output of out.mrt.0001 is:
++ applying max_consec to: NMA, NMS, HMA, HMS, NULL
saving 3dD command to file 'cmd.3dd.0001.txt'...
ISI statistics (5 elements) :
total per run
------ ------------------------------
total time 2760.0 690.0 690.0 690.0 690.0
total time: stim 24
by
Laura Verga
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AFNI Message Board
Dear Rick,
I tried to implement the make_random_timing script within the @stim_analyze script (see below), but when I run it I get the following message.
** removing output directory, /home/xxx/stim_results ...
++ creating output directory, /home/xxx/stim_results ...
iteration (of 5): 0000nums
nums: Subscript out of range.
What am I missing?
Thanks a lot!
______________________
by
Laura Verga
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AFNI Message Board
Dear Rick,
Thank you for this! It was very clear and helpful.
To answer you previous comment, yes it is ok to consider the rests as attached after the stimuli.
Kind regards,
Laura
by
Laura Verga
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AFNI Message Board
Hi Rick,
Thank you very much for the very quick and helpful response! The script works like a charm now, but I still have a couple of questions.
A bit of background concerning the study:
- four conditions NMA NMS HMA HMS for a total of 160 stimuli
- 4 functional runs with 40 stimuli each + 56 null events of 10 secs (14 x run)
- TR = 2
- each stimulus comprises a video clip of 10 s +
by
Laura Verga
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AFNI Message Board
Hello AFNI experts,
I am encountering an issue when attempting to run a script based on @stim_analyze.
More specifically, when I run the script I get the following message:
** removing output directory, stim_results ...
++ creating output directory, stim_results ...
iteration (of 100): 0000nums: Subscript out of range.
The directory stim_results gets created, but I think the issue h
by
Laura Verga
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AFNI Message Board