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Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
History of AFNI updates
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Postdoctoral Fellows: Cognitive Neuroscience of Semantics. Two post-doctoral research positions are available in the laboratory of Dr. Rutvik Desai at the University of South Carolina, Department of Psychology. The lab focuses on cognitive neuroscience of language and neural representation of concepts using neuroimaging, brain stimulation, patient studies, lesion-symptom mapping, and computationa
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DeLab
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AFNI Message Board
Postdoc+Faculty Position
This is a position aimed at candidates from underrepresented groups, and candidates from any background whose research relates to DEI issues. It starts as a postdoc position and is intended to convert to a faculty position in two years. The position is suitable for those who are finishing graduate school, are currently in a postdoc position, or in a non-tenure-track po
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DeLab
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AFNI Message Board
Postdoctoral Fellow: Cognitive Neuroscience of Semantics. A post-doctoral research position is available in the laboratory of Dr. Rutvik Desai at the University of South Carolina, Department of Psychology. The lab focuses on cognitive neuroscience of language and neural representation of concepts using neuroimaging, brain stimulation, patient studies, lesion-symptom mapping, and computational mod
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DeLab
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AFNI Message Board
Postdoctoral Fellow: Cognitive Neuroscience of Semantics. A post-doctoral research position is available in the laboratory of Dr. Rutvik Desai at the University of South Carolina, Department of Psychology. The lab focuses on cognitive neuroscience of language, neural representation of concepts, and grounded cognition using neuroimaging, brain stimulation, patient studies, lesion-symptom mapping,
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DeLab
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AFNI Message Board
Thanks. For now I am using -regress_no_fitts and that seems to be working. Is there a similar option for -regress_no_errts if you don't want to add -errts to 3dDecon? Could not find it in afni_proc.py help.
Now there is another strange problem. This may be a minor silly scripting thing, not sure. Most of the proc.s1 script seems to have run correctly, and all the corresponding files are g
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DeLab
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AFNI Message Board
Sorry one correction. I am running OSX version 10.13.6, not 15.7
rhdesai% sw_vers
ProductName: Mac OS X
ProductVersion: 10.13.6
BuildVersion: 17G14042
rhdesai% afni -ver
Precompiled binary macos_10.12_local: Mar 24 2021 (Version AFNI_21.0.21 'Titus')
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DeLab
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AFNI Message Board
Running a script generated by afni_proc.py called proc.s3. Goes up to 3dDeconvolve, runs 3dDeconvolve, in about 4 hrs generates the stats.s3 file, then appears to hang. The 3dDeconvolve process is running 6 hrs after saving the stats file but nothing seems to be happening no new files being generated in 6 hours. The last few lines of output.proc.s3 file are
...
++ Smallest FDR q [74 LP+LN+MP+
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DeLab
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AFNI Message Board
Postdoctoral Fellow: Cognitive Neuroscience of Semantics. A post-doctoral research position is available in the laboratory of Dr. Rutvik Desai at the University of South Carolina, Department of Psychology. The lab focuses on cognitive neuroscience of language, semantic memory, and embodiment of concepts using neuroimaging, brain stimulation, patient studies, lesion-symptom mapping, and computatio
by
DeLab
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AFNI Message Board