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Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
History of AFNI updates
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I am not sure what changed but QC was able to run, and AFNI opened! I do now receive the fatal signal 10 message when trying to run the next script in the pipeline though unfortunately (DWI_do_02.sh) .
Thanks Rick! We can correspond over email if this only pertains to me.
Kayla
Here is the output:
(base) ndsl-imab-2469:dwi-proc tognerikm$ ./DWI_do_02.sh p85
set: Variable name must
by
tognerikm
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AFNI Message Board
Here is the output!
(base) ndsl-imab-2469:~ tognerikm$ echo $0
-bash
(base) ndsl-imab-2469:~ tognerikm$ echo $DYLD_LIBRARY_PATH
/Applications/freesurfer/7.3.2/lib/gcc/lib:/opt/X11/lib/flat_namespace:/opt/X11/lib/flat_namespace:/opt/X11/lib/flat_namespace
Thanks!
Kayla
by
tognerikm
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AFNI Message Board
Afni is opening up normally without adjusting the DYLD variable!
by
tognerikm
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AFNI Message Board
Hi Rick,
We run the script in a -bash terminal with ./DWI_do_01_QC.sh
I have also tried to run it with the command bash DWI_do_01_QC.sh and I receive the same fatal signal 10 message.
Thanks!
Kayla
by
tognerikm
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AFNI Message Board
Yes! Here is the output
(base) ndsl-imab-2469:~ tognerikm$ afni_system_check.py -check_all
-------------------------------- general ---------------------------------
architecture: 64bit
cpu type: i386
system: Darwin
release: 21.6.0
version: Darwin Kernel Version 21.6.0: Sun Nov 6 23:31:16 PST 2022; root:xnu-8020.240.14~1/RELEA
by
tognerikm
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AFNI Message Board
Hello,
I am new to AFNI and am having some trouble running a script. We have made this script (DWI_do_01_QC.sh) to look at sagittal images all together for easier visual analysis of motion and striations on any individual slice to then aggregate and exclude. My colleague has run this script and it is working well on his machine, but I am receiving a "fatal signal 10" error message.
by
tognerikm
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AFNI Message Board